C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 208
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397126 ZNF208-001 ENSG00000160321 9606 - 19:21971191-22010943 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverOvaryTestisENST00000397126
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000397126 0.108±0.00 0.125±0.00 0.051±0.00 0.340±0.00 0.100±0.00 0.236±0.00 0.102±0.01 0.318±0.00 0.029±0.01 0.186±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 NAS zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0 800
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 0 606
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 0 606
ENSMUST00000137496 Zfp738-001 protein_coding Mus_musculus 0 603
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 0 579
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 0 579
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 0 579
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 0 579
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 0 579
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0 573
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0 510
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0 510
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0 468
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0 468
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0 409
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0 409
ENSMUST00000162659 Zfp677-001 protein_coding Mus_musculus 0 313
ENSMUST00000056107 Zfp677-002 protein_coding Mus_musculus 0 313
ENSMUST00000167914 Gm26965-001 nonsense_mediated_decay Mus_musculus 0 296
ENSMUST00000076123 Zfp58-001 protein_coding Mus_musculus 0 296
ENSMUST00000171518 Zfp58-002 protein_coding Mus_musculus 0 296
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 0 283
ENSMUST00000073312 Zfp760-201 protein_coding Mus_musculus 0 279
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 0 278
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 0 278
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 0 270
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 0 265
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 0 261
ENSMUST00000109732 Zfp429-001 protein_coding Mus_musculus 0 255
ENSMUST00000181071 Zfp429-002 protein_coding Mus_musculus 0 255
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 0 237
ENSMUST00000091523 Zfp58-004 protein_coding Mus_musculus 0 211
ENSMUST00000088787 Zfp948-201 protein_coding Mus_musculus 1.96182e-44 185
ENSMUST00000099449 Zfp808-001 protein_coding Mus_musculus 4.99997e-41 174
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 5e-36 158
ENSMUST00000165956 D3Ertd254e-201 protein_coding Mus_musculus 3e-34 152
ENSMUST00000101547 Zfp934-202 protein_coding Mus_musculus 7e-30 137
ENSMUST00000163534 Zfp58-003 protein_coding Mus_musculus 4e-27 128
ENSMUST00000076195 Zfp935-201 protein_coding Mus_musculus 2e-25 122
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 5e-21 108
ENSMUST00000082203 Zfp934-201 protein_coding Mus_musculus 5e-21 108
ENSMUST00000107989 Gm3604-201 protein_coding Mus_musculus 2e-16 94
ENSMUST00000187656 Gm3604-001 protein_coding Mus_musculus 2e-16 94
ENSMUST00000105718 Zfp933-001 protein_coding Mus_musculus 0.000000003 69
ENSMUST00000045969 Zfp458-201 protein_coding Mus_musculus 0.000000009 68

Loading