C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein L, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397279 APOL1-201 ENSG00000100342 9606 + 22:36253141-36267083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397279
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397279 7.976±0.00 2.742±0.00 1.616±1.37 5.130±0.49 5.237±3.83 2.608±1.92 9.392±1.27 4.312±0.00 3.264±0.00 2.686±0.00 6.709±3.59 15.762±0.00 8.742±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GS CIL_0003GS_0003 CGP 22:36226203-36267530
CIL_0003GV CIL_0003GV_0001 CGP 22:36253010-36388018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005254 IDA chloride channel activity
GO:0005515 IPI protein binding
GO:0005576 IEA:TAS extracellular region
GO:0005615 IDA extracellular space
GO:0006821 IDA chloride transport
GO:0006869 IEA lipid transport
GO:0008203 IEA cholesterol metabolic process
GO:0008289 IEA:IDA lipid binding
GO:0019835 IDA cytolysis
GO:0031224 IC intrinsic component of membrane
GO:0031640 IDA killing of cells of other organism
GO:0034361 IDA very-low-density lipoprotein particle
GO:0034364 IDA high-density lipoprotein particle
GO:0042157 IEA lipoprotein metabolic process
GO:0045087 IDA innate immune response
GO:0072562 IDA blood microparticle
GO:1902476 IDA chloride transmembrane transport

Homologs

No Homologs available.

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