C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MYC binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397572 MYCBP-001 ENSG00000214114 9606 - 1:38862964-38874105 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397572
Transcript ID Adipose Adrenal Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397572 3.704±0.00 2.588±0.00 2.961±0.84 3.328±0.00 1.038±0.00 2.198±0.00 0.371±0.00 4.488±0.00 5.838±1.10 11.670±3.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PZ CIL_0008PZ_0001 VISTA 1:38426937-39028462
CIL_0008G7 CIL_0008G7_0001 VISTA 1:38483085-39084457
CIL_0007Q3 CIL_0007Q3_0001 VISTA 1:38525828-39126769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005813 IDA centrosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007283 IEP spermatogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030400 Mycbp-001 protein_coding Mus_musculus 0 1282
ENSMUST00000137685 Mycbp-004 processed_transcript Mus_musculus 0 595
ENSMUST00000106202 Mycbp-002 protein_coding Mus_musculus 0 562
ENSMUST00000147340 Mycbp-003 processed_transcript Mus_musculus 0 263
ENSMUST00000114891 Igsf1-003 protein_coding Mus_musculus 0.0002 53

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