C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prothymosin, alpha pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397729 PTMAP8-001 ENSG00000243014 9606 + 3:117026698-117027039 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000397729
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000397729 0.841±0.00 0.580±0.00 0.426±0.00 0.805±0.00 0.445±0.00 0.045±0.00 0.352±0.00 0.096±0.00 0.310±0.00 0.556±0.00 0.114±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L7 CIL_0000L7_0002 CGP 3:115623324-117139389

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045897 Ptma-001 protein_coding Mus_musculus 0 372
ENSMUST00000052615 Gm9800-201 pseudogene Mus_musculus 0 366
ENSMUST00000178993 Gm4617-201 processed_pseudogene Mus_musculus 0 363
ENSMUST00000175818 Gm19815-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000122299 Gm15466-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000188533 Ptma-006 protein_coding Mus_musculus 0 322
ENSMUST00000179519 Gm21963-201 processed_pseudogene Mus_musculus 0 296
ENSMUST00000117321 Gm9009-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000177870 Gm6625-201 protein_coding Mus_musculus 0 257
ENSMUST00000145087 Gm6706-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000186932 Ptma-004 processed_transcript Mus_musculus 0 235
ENSMUST00000116278 Gm12838-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000148026 Gm12504-001 transcribed_processed_pseudogene Mus_musculus 0 193
ENSMUST00000120860 Gm12504-002 processed_transcript Mus_musculus 0 193
ENSMUST00000188699 Ptma-003 protein_coding Mus_musculus 7.00649e-45 183

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