C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398355 GEMIN8-002 ENSG00000046647 9606 - X:14008673-14029893 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398355
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398355 2.852±0.00 2.370±0.00 3.544±0.00 6.573±0.00 3.067±2.04 2.510±0.00 10.954±0.00 3.263±0.00 4.129±0.00 1.247±0.00 11.148±2.80 5.405±1.09 5.238±0.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000387 IDA spliceosomal snRNP assembly
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0032797 IDA SMN complex
GO:0034719 IDA SMN-Sm protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058710 Gm5455-201 processed_pseudogene Mus_musculus 0 470
ENSMUST00000056410 Gemin8-001 protein_coding Mus_musculus 0 466
ENSMUST00000087169 Gemin8-002 protein_coding Mus_musculus 0 457
ENSMUST00000130880 Gemin8-003 protein_coding Mus_musculus 0 457
ENSMUST00000152248 Gemin8-004 protein_coding Mus_musculus 0 278
ENSMUST00000118320 4930503H13Rik-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000166440 Gemin8-006 protein_coding Mus_musculus 0 202

Loading