C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 7 (eta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398422 CCT7-010 ENSG00000135624 9606 + 2:73234308-73253004 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyOvaryPlacentaTestisENST00000398422
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000398422 19.911±0.00 40.981±0.00 20.427±0.00 20.805±0.00 29.771±0.00 30.302±0.00 81.226±68.88 64.946±0.00 101.303±42.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RW CIL_0008RW_0001 VISTA 2:72647671-73248640
CIL_0003EL CIL_0003EL_0001 CGP 2:73228006-73253021
CIL_0003EI CIL_0003EI_0001 CGP 2:73233420-73284431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0005874 IDA microtubule
GO:0006457 TAS protein folding
GO:0044267 TAS:IEA cellular protein metabolic process
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032078 Cct7-201 protein_coding Mus_musculus 0 1221
ENSMUST00000186367 RP23-191A12.1-001 processed_pseudogene Mus_musculus 0 466

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