C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxysteroid dehydrogenase like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398803 HSDL2-001 ENSG00000119471 9606 + 9:112380080-112472405 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryTestisENST00000398803
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000398803 3.306±0.00 1.770±0.00 1.623±0.00 5.755±0.00 8.783±0.00 4.536±0.00 9.005±0.00 2.354±0.45 3.510±0.00 6.502±3.42 4.493±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000228 CIL_000228_0002 CGP 9:112217716-112472410
CIL_00022D CIL_00022D_0002 CGP 9:112379937-112669397

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005777 IDA peroxisome
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107528 Hsdl2-002 protein_coding Mus_musculus 0 475
ENSMUST00000030078 Hsdl2-001 protein_coding Mus_musculus 0 475
ENSMUST00000128792 Hsdl2-003 protein_coding Mus_musculus 0 265

Loading