C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxysteroid dehydrogenase like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398805 HSDL2-002 ENSG00000119471 9606 + 9:112379937-112472410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398805 15.470±0.00 4.412±0.00 7.437±0.00 7.641±5.44 16.153±9.31 4.665±3.26 29.752±12.05 14.730±1.27 9.316±4.83 4.870±1.43 12.953±7.07 15.030±3.32 5.462±0.61 7.431±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000228 CIL_000228_0002 CGP 9:112217716-112472410
CIL_00022D CIL_00022D_0002 CGP 9:112379937-112669397

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IEA mitochondrion
GO:0005777 IDA peroxisome
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030078 Hsdl2-001 protein_coding Mus_musculus 0 1053
ENSMUST00000107528 Hsdl2-002 protein_coding Mus_musculus 0 1016
ENSMUST00000128792 Hsdl2-003 protein_coding Mus_musculus 0 521

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