C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome c, somatic pseudogene 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399027 CYCSP55-001 ENSG00000214810 9606 + 6:34219439-34220066 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartMuscleTestisENST00000399027
Transcript ID Breast Colon Heart Muscle Testis
ENST00000399027 0.054±0.00 2.384±0.00 1.590±0.00 0.096±0.00 0.288±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000251 CIL_000251_0001 CGP 6:34018645-34246231

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073080 Gm10053-201 protein_coding Mus_musculus 0 368
ENSMUST00000077766 Cycs-002 retained_intron Mus_musculus 0 368
ENSMUST00000161401 Cycs-001 protein_coding Mus_musculus 0 368
ENSMUST00000118431 Gm13772-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000078246 Gm10108-201 protein_coding Mus_musculus 0 357
ENSMUST00000119355 Gm13252-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000120227 Gm14238-001 processed_pseudogene Mus_musculus 0 233

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