C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 271, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399070 ZNF271-002 ENSG00000257267 9606 + 18:35290282-35310766 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399070 1.724±0.00 2.055±0.00 0.500±0.00 1.322±0.05 1.835±0.79 2.448±1.70 1.806±1.31 2.297±1.78 1.258±0.04 1.171±0.52 0.784±0.03 0.847±0.30 0.948±0.10 2.080±1.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074941 Zfp35-001 protein_coding Mus_musculus 0 1459
ENSMUST00000186475 protein_coding Mus_musculus 7e-31 141
ENSMUST00000187028 nonsense_mediated_decay Mus_musculus 7e-31 141
ENSMUST00000108200 Zfp260-002 protein_coding Mus_musculus 2e-22 113
ENSMUST00000050735 Zfp260-001 protein_coding Mus_musculus 2e-22 113
ENSMUST00000163301 Zfp454-201 protein_coding Mus_musculus 2e-16 94
ENSMUST00000109131 Zfp454-003 protein_coding Mus_musculus 2e-16 94
ENSMUST00000050595 Zfp454-001 protein_coding Mus_musculus 2e-16 94
ENSMUST00000006903 Zfp184-201 protein_coding Mus_musculus 2e-16 94
ENSMUST00000102978 Zfp184-002 protein_coding Mus_musculus 2e-16 94
ENSMUST00000176580 Zfp184-001 nonsense_mediated_decay Mus_musculus 2e-16 94
ENSMUST00000176511 Zfp184-004 protein_coding Mus_musculus 2e-16 94
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000180016 Zfp62-202 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000061757 Zfp62-201 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000136539 Zfp62-010 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000109197 Zfp62-008 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000109198 Zfp62-001 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000068822 Zfp37-001 protein_coding Mus_musculus 0.000000003 69
ENSMUST00000173035 Gm20541-001 unprocessed_pseudogene Mus_musculus 0.00000001 68
ENSMUST00000034259 Zfp709-201 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000188685 Zfp709-001 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000118425 Zfp389-001 processed_pseudogene Mus_musculus 0.00009 55

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