C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 17 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399211 KRT17P1-001 ENSG00000131885 9606 - 17:16840743-16845883 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungTestisENST00000399211
Transcript ID Brain Breast Lung Testis
ENST00000399211 0.174±0.00 0.467±0.00 0.040±0.00 0.099±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 1450
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 1096
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 920
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 815
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 675
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 553
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0 501
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 472
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 436
ENSMUST00000107406 Krt42-002 retained_intron Mus_musculus 0 418
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 418
ENSMUST00000148502 Krt15-002 retained_intron Mus_musculus 0 294
ENSMUST00000100482 Krt26-001 protein_coding Mus_musculus 3e-24 117
ENSMUST00000038004 Krt25-001 protein_coding Mus_musculus 1e-23 115
ENSMUST00000148770 Krt26-002 processed_transcript Mus_musculus 1e-19 102

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