C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399343 CTA-215D11.4-001 ENSG00000232848 9606 - 1:8057245-8058463 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungMuscleOvaryTestisENST00000399343
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000399343 0.044±0.00 0.071±0.00 0.026±0.00 0.023±0.00 0.097±0.00 0.022±0.00 0.024±0.00 0.062±0.00 0.058±0.00 0.029±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0001 VISTA 1:7770379-8371827

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000121278 Gm13726-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000166414 Gm17097-001 processed_pseudogene Mus_musculus 8e-33 145

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