C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399417 DNAJA1P3-001 ENSG00000215007 9606 - X:107351650-107352843 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000399417
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000399417 0.027±0.00 0.112±0.00 0.109±0.00 0.072±0.00 0.160±0.00 0.059±0.00 0.074±0.00 0.115±0.00 0.200±0.00 0.031±0.02 0.063±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JC CIL_0006JC_0001 CGP X:107206632-107605251

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164233 Dnaja1-201 protein_coding Mus_musculus 0 1450
ENSMUST00000030118 Dnaja1-001 protein_coding Mus_musculus 0 1450
ENSMUST00000119884 Gm7816-001 processed_pseudogene Mus_musculus 0 1428
ENSMUST00000121585 Gm15542-001 processed_pseudogene Mus_musculus 0 1411
ENSMUST00000118081 Gm6335-001 processed_pseudogene Mus_musculus 0 1323
ENSMUST00000137246 Dnaja1-004 protein_coding Mus_musculus 0 998
ENSMUST00000129204 Dnaja1-002 processed_transcript Mus_musculus 0 942
ENSMUST00000148976 Dnaja1-008 processed_transcript Mus_musculus 0 824
ENSMUST00000125442 Dnaja1-009 protein_coding Mus_musculus 0 734
ENSMUST00000162103 Dnaja1-ps-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000137476 Dnaja1-007 processed_transcript Mus_musculus 0 431

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