C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399443 OSBPL1A-002 ENSG00000141447 9606 - 18:24162045-24272232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000399443
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000399443 17.912±0.00 16.494±0.00 3.341±0.00 32.501±8.42 16.463±13.57 17.623±14.53 17.676±13.46 9.708±8.64 3.068±0.51 5.672±3.30 19.180±13.77 5.233±2.44 2.468±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WS CIL_0005WS_0001 CGP 18:24138956-24397880
CIL_0005WR CIL_0005WR_0001 CGP 18:24162044-24453535

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005543 NAS phospholipid binding
GO:0005622 IC intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005765 TAS lysosomal membrane
GO:0005770 IDA late endosome
GO:0006869 IEA lipid transport
GO:0008203 NAS cholesterol metabolic process
GO:0015485 IDA cholesterol binding
GO:0016192 NAS vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121808 Osbpl1a-004 protein_coding Mus_musculus 0 2139
ENSMUST00000121888 Osbpl1a-005 protein_coding Mus_musculus 0 2063
ENSMUST00000117361 Osbpl1a-003 protein_coding Mus_musculus 0 2039
ENSMUST00000074352 Osbpl1a-001 protein_coding Mus_musculus 0 2037
ENSMUST00000119512 Osbpl1a-002 protein_coding Mus_musculus 0 1965
ENSMUST00000119043 Osbpl1a-017 protein_coding Mus_musculus 0 1857
ENSMUST00000118313 Osbpl1a-007 protein_coding Mus_musculus 0 1857
ENSMUST00000121774 Osbpl1a-006 protein_coding Mus_musculus 0 1716
ENSMUST00000143077 Osbpl1a-015 protein_coding Mus_musculus 0 765
ENSMUST00000154614 Osbpl1a-010 retained_intron Mus_musculus 0 721
ENSMUST00000145777 Osbpl1a-018 retained_intron Mus_musculus 0 675
ENSDART00000090468 osbpl1a-201 protein_coding Danio_rerio 0 542
ENSDART00000111318 osbpl1a-001 protein_coding Danio_rerio 0 529

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