C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heat shock 60kDa protein 1 (chaperonin) pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400121 HSPD1P8-001 ENSG00000215357 9606 + 13:78849231-78851208 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLungTestisENST00000400121
Transcript ID Adipose Lung Testis
ENST00000400121 0.006±0.00 0.005±0.00 0.018±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007M3 CIL_0007M3_0001 UCNEbase 13:78239925-79269621
CIL_0002EJ CIL_0002EJ_0001 CGP 13:78614291-79406477
CIL_00088S CIL_00088S_0001 VISTA 13:78698125-79299456

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027123 Hspd1-001 protein_coding Mus_musculus 0 1506
ENSMUST00000119713 Gm12141-001 processed_pseudogene Mus_musculus 0 1489
ENSMUST00000121815 Gm12725-001 processed_pseudogene Mus_musculus 0 1195
ENSMUST00000189810 RP24-292D18.1-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000127861 Hspd1-002 protein_coding Mus_musculus 0 597
ENSMUST00000120603 Gm14465-001 processed_pseudogene Mus_musculus 0 348

Loading