C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400984 RP11-122G18.7-001 ENSG00000215840 9606 + 1:161406068-161407082 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000400984
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000400984 0.645±0.00 0.856±0.00 0.258±0.00 0.152±0.00 0.384±0.11 0.099±0.05 0.231±0.00 0.297±0.00 0.430±0.07 1.333±0.00 0.174±0.12 1.055±0.69

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 616
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 616
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000120476 Gm13559-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000119578 Gm11643-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000117930 Gm13094-001 processed_pseudogene Mus_musculus 0 453
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 3e-32 143
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 1e-16 92

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