C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402760 RP4-753D5.3-001 ENSG00000216913 9606 - 6:50897615-50898225 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000402760
Transcript ID Bladder
ENST00000402760 0.535±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MC CIL_0007MC_0001 UCNEbase 6:50093187-51124665
CIL_00096L CIL_00096L_0001 VISTA 6:50417531-51018524
CIL_00092G CIL_00092G_0001 VISTA 6:50808492-51409496
CIL_0005MX CIL_0005MX_0001 CGP 6:50818723-52087625

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170350 Tnpo3-002 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000012679 Tnpo3-001 protein_coding Mus_musculus 0 542
ENSMUST00000115251 Tnpo3-201 protein_coding Mus_musculus 0 464
ENSMUST00000170647 Tnpo3-005 protein_coding Mus_musculus 0 464
ENSMUST00000171865 Tnpo3-006 retained_intron Mus_musculus 0 217

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