C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402798 RP11-367G18.2-001 ENSG00000218208 9606 + 6:113581501-113581947 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000402798
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000402798 0.112±0.00 0.119±0.00 0.058±0.00 0.109±0.00 0.026±0.00 0.116±0.00 0.026±0.00 0.142±0.00 0.194±0.10 0.117±0.00 0.131±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102844 Rps27a-004 protein_coding Mus_musculus 0 566
ENSMUST00000102845 Rps27a-003 protein_coding Mus_musculus 0 566
ENSMUST00000119780 Gm8430-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000078766 Rps27a-ps2-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000117559 Gm13215-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000121261 Gm8317-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000121742 Gm11759-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000150739 Rps27a-005 processed_transcript Mus_musculus 0 440
ENSMUST00000119963 Gm13815-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000120658 Gm13622-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000160015 Gm16139-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000191424 RP24-388H6.1-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000121696 Gm12882-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000185489 RP23-125B4.3-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000147782 Rps27a-002 processed_transcript Mus_musculus 0 331
ENSMUST00000181136 Gm27018-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000117540 Gm13428-001 processed_pseudogene Mus_musculus 1e-34 150
ENSMUST00000143418 Rps27a-001 processed_transcript Mus_musculus 0.000000000000003 86

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