C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy chain 8, skeletal muscle, perinatal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403437 MYH8-001 ENSG00000133020 9606 - 17:10390322-10421950 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyOvaryPlacentaTestisENST00000403437
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Ovary Placenta Testis
ENST00000403437 0.005±0.00 0.007±0.00 0.016±0.00 0.007±0.00 0.007±0.00 0.104±0.00 0.003±0.00 0.006±0.00 0.349±0.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IMP microfilament motor activity
GO:0003009 IMP skeletal muscle contraction
GO:0003774 IEA motor activity
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IMP:IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005859 NAS muscle myosin complex
GO:0006200 IMP ATP catabolic process
GO:0006936 NAS muscle contraction
GO:0008307 NAS structural constituent of muscle
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0016459 IEA myosin complex
GO:0016887 IMP ATPase activity
GO:0030017 IC sarcomere
GO:0030049 IMP muscle filament sliding
GO:0032027 TAS myosin light chain binding
GO:0032982 IC myosin filament
GO:0051015 TAS actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019625 Myh8-001 protein_coding Mus_musculus 0 7182
ENSMUST00000170159 Myh2-201 protein_coding Mus_musculus 0 5954
ENSMUST00000018641 Myh2-001 protein_coding Mus_musculus 0 5954
ENSMUST00000075734 Myh1-201 protein_coding Mus_musculus 0 5954
ENSMUST00000018637 Myh1-003 protein_coding Mus_musculus 0 5954
ENSMUST00000124516 Myh1-001 protein_coding Mus_musculus 0 5954
ENSMUST00000170942 Myh4-201 protein_coding Mus_musculus 0 5795
ENSMUST00000018632 Myh4-001 protein_coding Mus_musculus 0 5795
ENSMUST00000165221 Myh3-202 protein_coding Mus_musculus 0 4065
ENSMUST00000007301 Myh3-201 protein_coding Mus_musculus 0 4065
ENSMUST00000108689 Myh3-001 protein_coding Mus_musculus 0 4065
ENSMUST00000081911 Myh13-201 protein_coding Mus_musculus 0 3692
ENSMUST00000180845 Myh13-002 protein_coding Mus_musculus 0 3692
ENSMUST00000108684 Myh13-001 protein_coding Mus_musculus 0 3692
ENSMUST00000108686 Myh8-002 retained_intron Mus_musculus 0 3509
ENSDART00000098060 myhz1.1-201 protein_coding Danio_rerio 0 3291
ENSDART00000123003 myhz1.1-001 protein_coding Danio_rerio 0 3291
ENSDART00000098072 myhz1.1-202 protein_coding Danio_rerio 0 3282
ENSDART00000051360 MYH13 (3 of 10)-201 protein_coding Danio_rerio 0 3280
ENSDART00000122889 myhz1.3-001 protein_coding Danio_rerio 0 3275
ENSDART00000098067 myhz1.2-201 protein_coding Danio_rerio 0 3273
ENSDART00000131983 myhz1.2-001 protein_coding Danio_rerio 0 3273
ENSDART00000125917 myhc4-001 protein_coding Danio_rerio 0 3269
ENSDART00000051362 myhc4-201 protein_coding Danio_rerio 0 3264
ENSDART00000109263 myhz1.1-203 protein_coding Danio_rerio 0 3258
ENSDART00000051361 myhz2-201 protein_coding Danio_rerio 0 3219
ENSDART00000126873 myhz2-001 protein_coding Danio_rerio 0 3219
ENSDART00000139917 myha-001 protein_coding Danio_rerio 0 3175
ENSMUST00000168485 Myh7-201 protein_coding Mus_musculus 0 2782
ENSMUST00000102803 Myh7-001 protein_coding Mus_musculus 0 2782
ENSDART00000133338 CR450736.2-201 protein_coding Danio_rerio 0 2782
ENSDART00000123920 MYH13 (5 of 10)-202 protein_coding Danio_rerio 0 2769
ENSDART00000150162 si:ch211-24n20.3-001 protein_coding Danio_rerio 0 2737
ENSDART00000066527 smyhc3-201 protein_coding Danio_rerio 0 2726
ENSDART00000150060 smyhc3-001 protein_coding Danio_rerio 0 2726
ENSDART00000137989 CU633479.5-201 protein_coding Danio_rerio 0 2712
ENSDART00000135233 si:ch211-24n20.3-201 protein_coding Danio_rerio 0 2699
ENSDART00000137082 CU633479.6-201 protein_coding Danio_rerio 0 2676
ENSDART00000056853 smyhc1-203 protein_coding Danio_rerio 0 2634
ENSDART00000056849 smyhc2-001 protein_coding Danio_rerio 0 2540
ENSDART00000099532 vmhc-001 protein_coding Danio_rerio 0 2388
ENSDART00000128784 vmhcl-001 protein_coding Danio_rerio 0 2340
ENSDART00000078958 vmhcl-201 protein_coding Danio_rerio 0 2270
ENSDART00000135295 MYH13 (9 of 10)-201 protein_coding Danio_rerio 0 1567
ENSDART00000130531 myhz1.3-202 protein_coding Danio_rerio 0 1504
ENSDART00000075210 protein_coding Danio_rerio 0 1393
ENSMUST00000139052 Myh8-004 retained_intron Mus_musculus 0 1162
ENSDART00000130036 MYH13 (5 of 10)-201 protein_coding Danio_rerio 0 1051
ENSMUST00000108685 Myh8-003 protein_coding Mus_musculus 0 701
ENSMUST00000092995 Myh7b-001 protein_coding Mus_musculus 0 614
ENSMUST00000181027 Myh13-004 protein_coding Mus_musculus 0 398
ENSDART00000123565 vmhcl-004 protein_coding Danio_rerio 0 322
ENSMUST00000124337 Myh2-003 retained_intron Mus_musculus 0 318
ENSDART00000141922 vmhcl-002 protein_coding Danio_rerio 0 233
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 0 196
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 0 196

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