C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma binding protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404022 RBBP7-010 ENSG00000102054 9606 - X:16844690-16870361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000404022
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000404022 16.565±0.00 27.444±0.00 19.297±0.00 11.170±0.00 14.653±10.17 21.948±0.00 13.274±10.41 6.091±0.00 20.439±0.00 7.675±4.51 26.185±8.40 38.967±16.44 34.790±3.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112327 Rbbp7-003 protein_coding Mus_musculus 0 2436
ENSMUST00000033720 Rbbp7-001 protein_coding Mus_musculus 0 2346
ENSMUST00000112326 Rbbp7-002 protein_coding Mus_musculus 0 1652
ENSMUST00000118873 Gm6382-001 processed_pseudogene Mus_musculus 0 1303
ENSMUST00000138791 Rbbp7-005 protein_coding Mus_musculus 0 769
ENSDART00000130326 rbb4-201 protein_coding Danio_rerio 0 562
ENSDART00000048144 rbb4-001 protein_coding Danio_rerio 0 562
ENSMUST00000143681 Rbbp7-004 protein_coding Mus_musculus 0 333
ENSDART00000132807 rbb4-002 processed_transcript Danio_rerio 0 257

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