C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404462 RP1-217P22.2-001 ENSG00000219273 9606 + 6:38762905-38764694 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000404462
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000404462 0.096±0.00 0.156±0.00 0.084±0.00 0.044±0.00 0.098±0.00 0.016±0.00 0.051±0.00 0.015±0.00 0.052±0.00 0.036±0.00 0.020±0.00 0.013±0.00 0.056±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D3 CIL_0005D3_0001 CGP 6:38675925-39030529
CIL_0005D4 CIL_0005D4_0001 CGP 6:38715341-39087743

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115195 Dnajc2-006 protein_coding Mus_musculus 0 372
ENSMUST00000132962 Dnajc2-004 retained_intron Mus_musculus 0 372
ENSMUST00000115193 Dnajc2-003 protein_coding Mus_musculus 0 372
ENSMUST00000030771 Dnajc2-001 protein_coding Mus_musculus 0 372
ENSMUST00000147987 Dnajc2-005 retained_intron Mus_musculus 0 309
ENSMUST00000115192 Dnajc2-002 protein_coding Mus_musculus 0 292

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