C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain, phosphoinositide interacting 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404704 WIPI2-008 ENSG00000157954 9606 + 7:5190246-5231104 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000404704
Transcript ID Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000404704 3.989±0.00 1.103±0.00 1.661±0.00 1.768±0.00 5.168±3.32 8.724±6.67 9.549±2.67 74.192±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M3 CIL_0002M3_0001 CGP 7:5190188-5306870

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0000407 IDA pre-autophagosomal structure
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005776 IDA autophagic vacuole
GO:0005829 IDA cytosol
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0034045 IDA pre-autophagosomal structure membrane
GO:0043234 IDA protein complex
GO:0080025 IDA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110778 Wipi2-003 protein_coding Mus_musculus 0 1531
ENSMUST00000036872 Wipi2-001 protein_coding Mus_musculus 0 1280
ENSMUST00000153936 Wipi2-002 retained_intron Mus_musculus 0 444
ENSMUST00000143980 Wipi2-004 retained_intron Mus_musculus 0 364

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