C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: endoplasmic reticulum lectin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405123 ERLEC1-003 ENSG00000068912 9606 + 2:53787080-53818220 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENST00000405123
Transcript ID Adipose Bladder Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000405123 3.426±0.00 3.022±0.00 6.861±0.31 3.937±0.00 2.927±0.00 2.912±0.22 4.831±0.47 1.639±0.55 4.313±1.02 14.759±0.00 12.066±2.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003C1 CIL_0003C1_0001 CGP 2:53670293-53860160

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IDA glycoprotein binding
GO:0005515 IPI protein binding
GO:0005788 IDA endoplasmic reticulum lumen
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073192 Erlec1-004 protein_coding Mus_musculus 0 1681
ENSMUST00000129593 Erlec1-005 nonsense_mediated_decay Mus_musculus 0 880
ENSMUST00000155304 Erlec1-002 retained_intron Mus_musculus 0 436
ENSMUST00000143126 Erlec1-001 nonsense_mediated_decay Mus_musculus 0 296
ENSMUST00000152770 Erlec1-003 processed_transcript Mus_musculus 0 230

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