C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 63
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405405 GAPDHP63-001 ENSG00000218582 9606 - 6:79953005-79954011 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000405405
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000405405 0.136±0.00 0.344±0.00 0.320±0.00 0.249±0.00 0.210±0.00 0.191±0.00 0.055±0.00 0.077±0.00 0.017±0.00 1.757±0.00 0.052±0.00 0.181±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G9 CIL_0006G9_0001 CGP 6:79914812-80042527

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 1068
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 1068
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 1062
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 1062
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 1062
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 1062
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 1062
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 1062
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 1062
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 1062
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 1062
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 1057
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 1057
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 1057
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 1057
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 1057
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 1053
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 1053
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 1051
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 1051
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 1051
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 1050
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 1048
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 1048
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 1046
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 1040
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 1040
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 1035
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 1035
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 1033
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 1031
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 1029
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 1024
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 1018
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 1000
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 998
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 985
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 985
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 985
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 981
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 979
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 972
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 968
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 968
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 968
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 966
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 965
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 963
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 961
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 944
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 944
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 935
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 935
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 935
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 929
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 913
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 913
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 913
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 905
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 898
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 896
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 894
ENSMUST00000182449 Gm6944-001 processed_pseudogene Mus_musculus 0 891
ENSMUST00000182071 Gm9034-001 processed_pseudogene Mus_musculus 0 891
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 891
ENSMUST00000182514 Gm9568-001 processed_pseudogene Mus_musculus 0 880
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 880
ENSMUST00000182757 Gm9658-001 processed_pseudogene Mus_musculus 0 874
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000121506 Gm5270-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 833
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 833
ENSMUST00000182234 Gm4804-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000182954 Gm8318-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000182375 Gm8492-001 processed_pseudogene Mus_musculus 0 817
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 815
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 815
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000182170 Gm4819-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 795
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 789
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 789
ENSMUST00000122207 Gm12864-001 processed_pseudogene Mus_musculus 0 789
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000183288 Gm7833-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000182020 Gm7481-001 processed_pseudogene Mus_musculus 0 767
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000118688 Gm8661-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 760
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 760
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000184810 Gm11214-001 translated_processed_pseudogene Mus_musculus 0 749
ENSMUST00000119237 Gm13668-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 734
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 734
ENSMUST00000182830 Gm8513-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000182254 Gm9146-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000188558 RP23-337B16.2-001 processed_pseudogene Mus_musculus 0 725
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000180769 Gm7784-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000182628 Gm26937-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000182864 Gm5327-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000179088 RP24-347J6.2-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000182028 Gm8919-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000183173 Gm9423-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000183322 Gm9621-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000183298 Gm8529-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000182081 Gm9162-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000119554 Gm9439-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000183005 Gm8984-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000182963 Gm9135-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000182730 Gm5272-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000181115 Gm8357-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000120728 Gm16177-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000182703 Gm26929-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000118175 Gm11929-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000182069 Gm18848-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000183067 Gm9358-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000182468 Gm7656-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000182505 Gm9274-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000120311 Gm12266-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000182543 Gm7577-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000182282 Gm17798-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000182616 Gm7572-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000184252 Gm11214-002 protein_coding Mus_musculus 0 486
ENSMUST00000182990 Gm26970-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000118983 Gm11447-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000183320 Gm8167-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000183270 Gm17799-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000187802 RP24-369P14.2-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000182807 Gm27043-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000097296 Gm17199-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000147954 Gapdh-006 retained_intron Mus_musculus 0 339
ENSMUST00000161466 Gm16297-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000182182 Gm8993-001 processed_pseudogene Mus_musculus 5.60519e-45 185
ENSMUST00000121919 Gm14491-001 processed_pseudogene Mus_musculus 5e-36 156
ENSMUST00000186767 RP24-468E2.1-001 unprocessed_pseudogene Mus_musculus 3e-28 130
ENSMUST00000182561 Gm27024-001 processed_pseudogene Mus_musculus 4e-22 110

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