C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405422 PPIAP31-001 ENSG00000217094 9606 - 10:32188323-32188817 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000405422
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000405422 0.093±0.00 0.226±0.00 0.256±0.02 0.098±0.00 0.314±0.28 0.125±0.03 0.166±0.14 0.427±0.00 0.085±0.00 0.364±0.00 0.126±0.00 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XJ CIL_0000XJ_0002 CGP 10:32009010-32378798

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 682
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 658
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 643
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 640
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 625
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 608
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 608
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 582
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 564
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 307
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 241
ENSMUST00000185012 Gm12728-003 protein_coding Mus_musculus 0 235
ENSMUST00000184254 Gm12728-002 protein_coding Mus_musculus 0 235
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 195
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 3e-30 135

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