C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406079 RP1-261G23.4-001 ENSG00000218107 9606 - 6:43705949-43706751 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartTestisENST00000406079
Transcript ID Breast Heart Testis
ENST00000406079 0.584±0.00 0.037±0.00 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0001 VISTA 6:43493027-44094540

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029316 Exosc8-001 protein_coding Mus_musculus 0 486
ENSMUST00000134892 Exosc8-006 retained_intron Mus_musculus 0 342
ENSMUST00000150923 Exosc8-003 retained_intron Mus_musculus 0 235
ENSMUST00000154787 Exosc8-008 nonsense_mediated_decay Mus_musculus 5e-20 102

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