C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406185 RP11-480N24.3-001 ENSG00000219222 9606 + 6:43310231-43310357 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyOvaryTestisENST00000406185
Transcript ID Adrenal Brain Colon Kidney Ovary Testis
ENST00000406185 0.396±0.00 0.221±0.00 20.504±0.00 0.202±0.00 18.933±18.39 0.853±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 1e-37 158
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 1e-37 158
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 1e-37 158
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 1e-37 158
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 1e-37 158
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 6e-36 152
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 6e-36 152
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 6e-36 152
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 2e-35 150
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 4e-33 143

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