| Transcript ID | Testis |
|---|---|
| ENST00000406522 | 6.333±0.00 |
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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | armadillo repeat gene deleted in velocardiofacial syndrome | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000406522  |
ARVCF-012 |
ENSG00000099889 |
9606 | - |
22:19971228-19987093  |
protein_coding |
|
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Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008BW | CIL_0008BW_0001 | VISTA | 22:19453681-20054184 |
| CIL_00099J | CIL_00099J_0001 | VISTA | 22:19461833-20062532 |
| CIL_00095F | CIL_00095F_0001 | VISTA | 22:19497462-20100487 |
| CIL_0006HK | CIL_0006HK_0002 | CGP | 22:19969896-20065926 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005488 | IEA | binding |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IEA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0005886 | IEA | plasma membrane |
| GO:0007275 | IEA | multicellular organismal development |
| GO:0016337 | IEA | single organismal cell-cell adhesion |
| GO:0016339 | IEA | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000115610
|
Arvcf-005 | protein_coding | Mus_musculus | 0 | 2789 |
|
ENSMUST00000115612
|
Arvcf-002 | protein_coding | Mus_musculus | 0 | 2756 |
|
ENSMUST00000115614
|
Arvcf-003 | protein_coding | Mus_musculus | 0 | 2756 |
|
ENSMUST00000184717
|
ARVCF-201 | protein_coding | Mus_musculus | 0 | 2689 |
|
ENSMUST00000090103
|
Arvcf-201 | protein_coding | Mus_musculus | 0 | 2689 |
|
ENSMUST00000115613
|
Arvcf-001 | protein_coding | Mus_musculus | 0 | 2689 |
|
ENSMUST00000150253
|
Arvcf-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1062 |
|
ENSMUST00000150484
|
Arvcf-007 | processed_transcript | Mus_musculus | 0 | 531 |
|
ENSMUST00000126183
|
Arvcf-008 | retained_intron | Mus_musculus | 0 | 394 |
|
ENSMUST00000155548
|
Arvcf-006 | processed_transcript | Mus_musculus | 0 | 364 |
