C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HLA complex group 4B (non-protein coding)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406611 HCG4B-001 ENSG00000220391 9606 - CHR_HSCHR6_MHC_QBL_CTG1:29917179-29918169 unprocessed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074806 H2-Q2-001 protein_coding Mus_musculus 0 206
ENSMUST00000097335 Gm8909-201 protein_coding Mus_musculus 0 191
ENSMUST00000040467 Gm8909-001 protein_coding Mus_musculus 0 191
ENSMUST00000173353 Gm8909-002 protein_coding Mus_musculus 0 191
ENSMUST00000174250 H2-K2-001 unprocessed_pseudogene Mus_musculus 0 189
ENSMUST00000174161 H2-T23-003 retained_intron Mus_musculus 0 189
ENSMUST00000172979 H2-Q5-001 polymorphic_pseudogene Mus_musculus 1.96182e-44 183
ENSMUST00000174854 H2-Q5-002 retained_intron Mus_musculus 1.96182e-44 183
ENSMUST00000174471 H2-T23-005 retained_intron Mus_musculus 7.9874e-44 182
ENSMUST00000174839 H2-T23-002 retained_intron Mus_musculus 7.9874e-44 182
ENSMUST00000102678 H2-T23-001 protein_coding Mus_musculus 7.9874e-44 182
ENSMUST00000076256 H2-Q7-201 protein_coding Mus_musculus 3.99931e-42 176
ENSMUST00000078205 H2-Q7-202 protein_coding Mus_musculus 3.99931e-42 176
ENSMUST00000116598 H2-Q7-203 protein_coding Mus_musculus 3.99931e-42 176
ENSMUST00000173788 H2-Q7-003 retained_intron Mus_musculus 3.99931e-42 176
ENSMUST00000071951 H2-Q7-001 protein_coding Mus_musculus 3.99931e-42 176
ENSMUST00000174778 Gm10499-001 retained_intron Mus_musculus 8e-39 165
ENSMUST00000172538 C920025E04Rik-001 unprocessed_pseudogene Mus_musculus 3e-38 163
ENSMUST00000174094 Gm10499-002 transcribed_unprocessed_pseudogene Mus_musculus 3e-33 147

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