C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glypican 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406757 GPC3-002 ENSG00000147257 9606 - X:133596366-133753702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000406757
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000406757 17.265±0.00 3.619±0.00 8.593±5.93 6.977±0.00 0.421±0.00 0.316±0.00 3.349±0.00 0.225±0.00 10.303±10.08 158.969±0.00 2.191±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GF CIL_0000GF_0002 CGP X:133300103-133985895
CIL_0000SR CIL_0000SR_0001 CGP X:133535745-134246207

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0016020 IEA membrane
GO:0043395 IEA heparan sulfate proteoglycan binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069360 Gpc3-001 protein_coding Mus_musculus 0 998
ENSMUST00000114857 Gpc3-002 protein_coding Mus_musculus 0 634

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