C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBAP1-MVB12-associated (UMA) domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406829 RPA3OS-001 ENSG00000219545 9606 + 7:7772361-7879223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000406829
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000406829 2.279±0.00 3.163±0.00 2.077±0.00 4.095±0.00 2.546±0.00 2.861±0.00 6.405±0.00 2.562±1.00 3.336±0.00 0.569±0.00 4.240±0.84 3.131±0.82 3.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V4 CIL_0002V4_0001 CGP 7:7566872-7718607
CIL_0002V7 CIL_0002V7_0001 CGP 7:7636518-8004059
CIL_0002V6 CIL_0002V6_0001 CGP 7:7640711-8094272

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159168 Gm16039-005 protein_coding Mus_musculus 0 324
ENSMUST00000159433 Gm16039-002 protein_coding Mus_musculus 0 324
ENSMUST00000160253 Gm16039-003 processed_transcript Mus_musculus 0 309
ENSMUST00000162034 Gm16039-009 protein_coding Mus_musculus 0 309
ENSMUST00000160705 Gm16039-008 protein_coding Mus_musculus 0 272

Loading