C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406913 RP11-129H15.3-001 ENSG00000219135 9606 - 6:121679972-121680459 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000406913
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000406913 0.149±0.00 0.189±0.00 0.063±0.00 0.158±0.00 0.117±0.00 0.126±0.00 0.031±0.00 0.535±0.00 0.037±0.00 0.039±0.00 0.055±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078729 Gm20900-201 processed_pseudogene Mus_musculus 0 326
ENSMUST00000180011 Gm8112-201 processed_pseudogene Mus_musculus 0 315
ENSMUST00000102483 Rpl23a-001 protein_coding Mus_musculus 0 315
ENSMUST00000127270 Rpl23a-002 retained_intron Mus_musculus 0 315
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000096020 Gm10335-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000099431 Gm10132-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000104925 Rpl23a-ps3-201 protein_coding Mus_musculus 0 309
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000118777 Rpl23a-ps14-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000148102 Gm3362-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000121605 Gm12322-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000105085 Gm10923-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000105087 Gm3940-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000178439 Gm21959-201 processed_pseudogene Mus_musculus 0 254
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 0 211

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