C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein, FOG family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407775 ZFPM2-002 ENSG00000169946 9606 + 8:105318692-105804532 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000407775
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000407775 1.584±0.00 1.211±0.00 2.792±0.84 0.893±0.58 0.849±0.00 2.198±1.75 0.271±0.00 0.527±0.19 2.380±0.00 4.351±0.00 4.855±5.00 1.025±0.14 2.133±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OF CIL_0007OF_0001 UCNEbase 8:104531728-105804547
CIL_0008AI CIL_0008AI_0001 VISTA 8:104568632-105169919
CIL_00060E CIL_00060E_0001 CGP 8:104590733-106752694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001105 NAS RNA polymerase II transcription coactivator activity
GO:0001570 IEA vasculogenesis
GO:0001701 IEA in utero embryonic development
GO:0003148 IMP outflow tract septum morphogenesis
GO:0003221 IMP right ventricular cardiac muscle tissue morphogenesis
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007506 IEA gonadal mesoderm development
GO:0007507 IEA heart development
GO:0007596 TAS blood coagulation
GO:0008134 IPI transcription factor binding
GO:0008270 NAS zinc ion binding
GO:0030324 IEA lung development
GO:0045599 IMP negative regulation of fat cell differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048568 IEA embryonic organ development
GO:0048738 IEA cardiac muscle tissue development
GO:0060412 IMP ventricular septum morphogenesis
GO:0060548 IEA negative regulation of cell death
GO:2000020 IEA positive regulation of male gonad development
GO:2000195 IEA negative regulation of female gonad development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053467 Zfpm2-201 protein_coding Mus_musculus 0 5866
ENSDART00000141941 zfpm2a-001 protein_coding Danio_rerio 0.0000000000001 84

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