C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroguidin, EIF4E binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000408901 NGDN-001 ENSG00000129460 9606 + 14:23469688-23478193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000408901
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000408901 5.956±0.00 11.811±0.00 1.278±0.00 8.915±0.44 6.427±0.40 6.824±1.24 3.109±0.33 7.722±4.39 4.818±0.80 5.182±1.43 3.954±1.17 14.640±6.29 9.931±0.61 19.222±4.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006417 IEA regulation of translation
GO:0042995 IEA cell projection
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022815 Ngdn-201 protein_coding Mus_musculus 0 1088

Loading