C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerization domain containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409157 KCTD18-002 ENSG00000155729 9606 - 2:200488958-200510068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409157
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409157 3.577±0.00 4.621±0.00 0.698±0.00 4.127±0.00 4.686±0.00 1.775±0.00 1.575±0.00 3.888±0.00 1.547±0.60 0.851±0.00 1.354±0.97 4.835±0.70 1.452±0.43 5.932±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B2 CIL_0002B2_0001 CGP 2:200305881-200519784
CIL_0002AZ CIL_0002AZ_0001 CGP 2:200488952-200583782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114410 Kctd18-001 protein_coding Mus_musculus 0 1149
ENSMUST00000163061 Kctd18-009 nonsense_mediated_decay Mus_musculus 0 989
ENSMUST00000161608 Kctd18-002 nonsense_mediated_decay Mus_musculus 0 989
ENSMUST00000068000 Kctd18-003 retained_intron Mus_musculus 0 815
ENSMUST00000160614 Kctd18-007 retained_intron Mus_musculus 0 723
ENSMUST00000163006 Kctd18-008 retained_intron Mus_musculus 0 412
ENSMUST00000162410 Kctd18-004 retained_intron Mus_musculus 0 403
ENSMUST00000164963 Kctd18-201 protein_coding Mus_musculus 0 324
ENSMUST00000159826 Kctd18-006 protein_coding Mus_musculus 0 324
ENSMUST00000160130 Kctd18-005 retained_intron Mus_musculus 0 231
ENSMUST00000189298 Kctd18-010 retained_intron Mus_musculus 1e-35 156

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