C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATH1, acid trehalase-like 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409479 ATHL1-002 ENSG00000142102 9606 + 11:289559-295258 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000409479
Transcript ID Adipose Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000409479 0.953±0.00 1.901±0.00 0.564±0.00 0.159±0.00 0.663±0.43 0.767±0.00 5.376±0.00 1.463±0.32 1.808±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B4 CIL_0002B4_0001 CGP 11:278365-296107
CIL_0002B6 CIL_0002B6_0001 CGP 11:289135-299526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005975 IEA carbohydrate metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079403 Athl1-001 protein_coding Mus_musculus 0 953
ENSMUST00000169736 Athl1-003 retained_intron Mus_musculus 0 876
ENSMUST00000163094 Athl1-004 nonsense_mediated_decay Mus_musculus 0 872
ENSMUST00000164580 Athl1-006 protein_coding Mus_musculus 0 793
ENSMUST00000164337 Athl1-002 nonsense_mediated_decay Mus_musculus 0 754

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