| Transcript ID | Breast | Colon |
|---|---|---|
| ENST00000409487 | 3.459±0.00 | 4.626±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | zinc finger E-box binding homeobox 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000409487  |
ZEB2-011 |
ENSG00000169554 |
9606 | - |
2:144388001-144517730  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007L9 | CIL_0007L9_0003 | UCNEbase | 2:143915206-145198080 |
| CIL_0006M9 | CIL_0006M9_0001 | CGP | 2:143938068-144524580 |
| CIL_0008S1 | CIL_0008S1_0001 | VISTA | 2:144130532-144732245 |
| CIL_0008RV | CIL_0008RV_0001 | VISTA | 2:144143079-144743846 |
| CIL_000944 | CIL_000944_0001 | VISTA | 2:144209700-144811716 |
| CIL_0008FM | CIL_0008FM_0001 | VISTA | 2:144282035-144883963 |
| CIL_0007GY | CIL_0007GY_0001 | CGP | 2:144388001-147930826 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | IMP | negative regulation of transcription from RNA polymerase II promoter |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA:IDA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0007399 | NAS | nervous system development |
| GO:0019208 | NAS | phosphatase regulator activity |
| GO:0045636 | ISS | positive regulation of melanocyte differentiation |
| GO:0045944 | IMP | positive regulation of transcription from RNA polymerase II promoter |
| GO:0046872 | IEA | metal ion binding |
| GO:0048023 | IC | positive regulation of melanin biosynthetic process |
| GO:0048066 | ISS | developmental pigmentation |
| GO:0097324 | ISS | melanocyte migration |
| GO:1903056 | ISS | regulation of melanosome organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000028229
|
Zeb2-002 | protein_coding | Mus_musculus | 0 | 7899 |
|
ENSMUST00000068415
|
Zeb2-201 | protein_coding | Mus_musculus | 0 | 7738 |
|
ENSMUST00000176438
|
Zeb2-001 | protein_coding | Mus_musculus | 0 | 7738 |
|
ENSMUST00000177302
|
Zeb2-007 | protein_coding | Mus_musculus | 0 | 5731 |
|
ENSMUST00000076836
|
Zeb2-011 | protein_coding | Mus_musculus | 0 | 5674 |
|
ENSMUST00000176732
|
Zeb2-013 | protein_coding | Mus_musculus | 0 | 1467 |
|
ENSMUST00000131635
|
Zeb2-008 | processed_transcript | Mus_musculus | 0 | 614 |
|
ENSDART00000090019
|
zeb2b-201 | protein_coding | Danio_rerio | 0 | 604 |
|
ENSMUST00000145529
|
Zeb2-004 | retained_intron | Mus_musculus | 0 | 507 |
|
ENSMUST00000127520
|
Zeb2-005 | protein_coding | Mus_musculus | 0 | 435 |
|
ENSMUST00000153561
|
Zeb2-006 | protein_coding | Mus_musculus | 0 | 265 |
|
ENSMUST00000123037
|
Zeb2-012 | retained_intron | Mus_musculus | 0 | 263 |
|
ENSMUST00000124942
|
Zeb2-009 | protein_coding | Mus_musculus | 0 | 263 |
|
ENSMUST00000152232
|
Zeb2-010 | protein_coding | Mus_musculus | 0 | 263 |
|
ENSMUST00000126743
|
Zeb2-003 | processed_transcript | Mus_musculus | 6e-27 | 128 |
