C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATH1, acid trehalase-like 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409548 ATHL1-004 ENSG00000142102 9606 + 11:289138-296107 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverPlacentaENST00000409548
Transcript ID Breast Liver Placenta
ENST00000409548 0.435±0.00 1.067±0.00 1.360±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B4 CIL_0002B4_0001 CGP 11:278365-296107
CIL_0002B6 CIL_0002B6_0001 CGP 11:289135-299526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005975 IEA carbohydrate metabolic process
GO:0016798 IEA hydrolase activity, acting on glycosyl bonds

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079403 Athl1-001 protein_coding Mus_musculus 0 1687
ENSMUST00000164580 Athl1-006 protein_coding Mus_musculus 0 1506
ENSMUST00000163094 Athl1-004 nonsense_mediated_decay Mus_musculus 0 979
ENSMUST00000164337 Athl1-002 nonsense_mediated_decay Mus_musculus 0 977
ENSMUST00000169736 Athl1-003 retained_intron Mus_musculus 0 876

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