C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/threonine kinase 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409638 STK16-001 ENSG00000115661 9606 + 2:219245455-219250337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000409638
Transcript ID Kidney
ENST00000409638 1.876±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_000416 CIL_000416_0002 CGP 2:219229757-219245478
CIL_0006EH CIL_0006EH_0001 CGP 2:219236606-219250337
CIL_0006NV CIL_0006NV_0001 CGP 2:219245455-219278170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0004715 IEA non-membrane spanning protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005798 IEA Golgi-associated vesicle
GO:0006468 IEA protein phosphorylation
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046777 IDA protein autophosphorylation
GO:0071560 IEA cellular response to transforming growth factor beta stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027401 Stk16-001 protein_coding Mus_musculus 0 1190
ENSMUST00000191108 Stk16-011 nonsense_mediated_decay Mus_musculus 0 1125
ENSMUST00000189698 Stk16-014 protein_coding Mus_musculus 0 869
ENSMUST00000135484 Stk16-002 retained_intron Mus_musculus 0 606
ENSMUST00000188460 Stk16-012 protein_coding Mus_musculus 0 603
ENSMUST00000142052 Stk16-010 processed_transcript Mus_musculus 0 592
ENSMUST00000117869 Gm12004-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000126328 Stk16-007 retained_intron Mus_musculus 0 525
ENSMUST00000131738 Stk16-008 processed_transcript Mus_musculus 0 455
ENSMUST00000123825 Stk16-005 protein_coding Mus_musculus 0 436
ENSMUST00000144355 Stk16-004 protein_coding Mus_musculus 0 436
ENSMUST00000189242 Stk16-016 retained_intron Mus_musculus 0 414
ENSMUST00000156012 Stk16-009 retained_intron Mus_musculus 0 324
ENSMUST00000186350 Stk16-015 retained_intron Mus_musculus 0 313
ENSMUST00000145144 Stk16-006 retained_intron Mus_musculus 0 311
ENSMUST00000139627 Stk16-003 retained_intron Mus_musculus 8.00141e-43 180
ENSMUST00000079464 Tuba4a-002 protein_coding Mus_musculus 2e-23 115
ENSMUST00000186213 Tuba4a-001 protein_coding Mus_musculus 2e-23 115

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