C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | LIM and senescent cell antigen-like domains 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000410038  |
LIMS2-006 |
ENSG00000072163 |
9606 | - |
2:127638470-127648253  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000197 | CIL_000197_0001 | CGP | 2:127638381-127681786 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
| GO:0005829 | TAS | cytosol |
| GO:0005886 | IEA | plasma membrane |
| GO:0005925 | IDA | focal adhesion |
| GO:0008270 | IEA | zinc ion binding |
| GO:0034329 | TAS | cell junction assembly |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000025254
|
Lims2-201 | protein_coding | Mus_musculus | 0 | 841 |
|
ENSDART00000033980
|
lims1-201 | protein_coding | Danio_rerio | 0 | 599 |
|
ENSMUST00000105468
|
Lims1-003 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000020078
|
Lims1-001 | protein_coding | Mus_musculus | 0 | 438 |
|
ENSMUST00000020077
|
Lims1-002 | protein_coding | Mus_musculus | 0 | 370 |
|
ENSMUST00000119116
|
Gm15665-001 | processed_pseudogene | Mus_musculus | 0 | 224 |
|
ENSMUST00000148799
|
Lims1-005 | processed_transcript | Mus_musculus | 5e-23 | 113 |
