C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB6C, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000410061 RAB6C-001 ENSG00000222014 9606 + 2:129979664-129982738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000410061
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000410061 0.019±0.00 0.018±0.00 0.792±0.02 0.067±0.04 0.058±0.04 0.036±0.03 0.029±0.00 0.081±0.00 0.007±0.00 0.092±0.05 0.218±0.13 0.211±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA:IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IC:IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0006184 IDA:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 TAS:IEA small GTPase mediated signal transduction
GO:0010824 IMP regulation of centrosome duplication
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0022402 IMP cell cycle process
GO:0042493 IDA response to drug

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098252 Rab6a-002 protein_coding Mus_musculus 0 1598
ENSMUST00000032946 Rab6a-001 protein_coding Mus_musculus 0 1459
ENSMUST00000107048 Rab6a-003 protein_coding Mus_musculus 0 1299
ENSMUST00000118877 Gm13082-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000123960 Rab6a-004 retained_intron Mus_musculus 0 335
ENSMUST00000146003 Mrpl48-003 processed_transcript Mus_musculus 0 267

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