C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411521 EIF4A1P3-001 ENSG00000231018 9606 - 9:131782570-131782813 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLungOvaryTestisENST00000411521
Transcript ID Adipose Adrenal Lung Ovary Testis
ENST00000411521 0.062±0.00 0.064±0.00 0.061±0.00 0.960±0.00 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EB CIL_0002EB_0002 CGP 9:131576770-132079908

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142348 Eif4a1-010 processed_transcript Mus_musculus 0 279
ENSMUST00000123995 Eif4a1-002 retained_intron Mus_musculus 0 265
ENSMUST00000128519 Eif4a1-012 retained_intron Mus_musculus 0 265
ENSMUST00000163666 Eif4a1-001 protein_coding Mus_musculus 0 265
ENSMUST00000122226 Eif4a-ps4-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000118589 Gm15568-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000121086 Gm11258-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000133067 Eif4a1-009 processed_transcript Mus_musculus 6e-39 163
ENSMUST00000140186 Eif4a1-011 processed_transcript Mus_musculus 6e-39 163

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