C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 64
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411674 HNRNPA1P64-001 ENSG00000213559 9606 - 1:80451083-80452004 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyMuscleOvaryTestisENST00000411674
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Muscle Ovary Testis
ENST00000411674 0.055±0.00 0.071±0.00 0.125±0.00 0.071±0.00 0.065±0.00 0.020±0.00 0.014±0.00 0.038±0.00 0.023±0.01 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003A CIL_00003A_0002 CGP 1:78889764-81992436

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 776
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 776
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 771
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 486
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 6e-35 152

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