C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411735 HNRNPA1P46-001 ENSG00000228020 9606 - 1:191146025-191146961 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyOvaryPlacentaTestisENST00000411735
Transcript ID Adipose Adrenal Brain Colon Kidney Ovary Placenta Testis
ENST00000411735 0.039±0.00 0.027±0.00 0.082±0.00 0.012±0.00 0.027±0.00 0.104±0.08 0.110±0.00 0.082±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1014
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1014
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 965
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 795
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 765
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 765
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 638
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000090002 Hnrnpa2b1-202 protein_coding Mus_musculus 2e-30 137
ENSMUST00000069949 Hnrnpa2b1-201 protein_coding Mus_musculus 2e-30 137
ENSMUST00000114459 Hnrnpa2b1-203 protein_coding Mus_musculus 2e-30 137
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 7e-29 132

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