C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRAM domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411896 GRAMD1A-004 ENSG00000089351 9606 + 19:35000426-35026469 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000411896
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000411896 8.889±0.00 32.233±0.00 1.382±0.00 8.469±0.00 1.923±1.62 6.934±0.00 0.610±0.00 25.271±0.00 5.085±0.00 27.723±19.00 15.591±0.00 11.372±4.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UF CIL_0003UF_0002 CGP 19:34994784-35040448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001280 Gramd1a-001 protein_coding Mus_musculus 0 2386
ENSMUST00000085636 Gramd1a-201 protein_coding Mus_musculus 0 1585
ENSMUST00000186634 Gramd1a-002 nonsense_mediated_decay Mus_musculus 0 1585
ENSMUST00000185985 Gramd1a-003 retained_intron Mus_musculus 0 1585
ENSMUST00000188032 Gramd1a-004 retained_intron Mus_musculus 0 1550
ENSMUST00000187679 Gramd1a-007 protein_coding Mus_musculus 0 614
ENSMUST00000186723 Gramd1a-008 protein_coding Mus_musculus 0 300
ENSMUST00000185514 Gramd1a-006 nonsense_mediated_decay Mus_musculus 0 257
ENSDART00000108574 GRAMD1B (1 of 2)-201 protein_coding Danio_rerio 0 248
ENSMUST00000165104 Gramd1b-201 protein_coding Mus_musculus 0 219
ENSMUST00000045682 Gramd1b-001 protein_coding Mus_musculus 0 219
ENSMUST00000118159 Gramd1b-012 protein_coding Mus_musculus 0 219
ENSMUST00000119373 Gramd1b-002 protein_coding Mus_musculus 0 219
ENSMUST00000121357 Gramd1b-011 protein_coding Mus_musculus 0 219
ENSMUST00000150977 Gramd1b-008 retained_intron Mus_musculus 2e-33 148

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