C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | plakophilin 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000411900  |
PKP4-009 |
ENSG00000144283 |
9606 | + |
2:158457136-158588950  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005U5 | CIL_0005U5_0001 | CGP | 2:158456964-158862958 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0016337 | IEA | single organismal cell-cell adhesion |
| GO:0032321 | IEA | positive regulation of Rho GTPase activity |
| GO:0032467 | IEA | positive regulation of cytokinesis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000168631
|
Pkp4-201 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000183625
|
Pkp4-006 | processed_transcript | Mus_musculus | 0 | 508 |
|
ENSMUST00000037903
|
Pkp4-004 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000123908
|
Pkp4-002 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000183359
|
Pkp4-003 | nonsense_mediated_decay | Mus_musculus | 0 | 508 |
|
ENSMUST00000102754
|
Pkp4-001 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000184332
|
Pkp4-005 | nonsense_mediated_decay | Mus_musculus | 0 | 311 |
|
ENSMUST00000126749
|
Pkp4-009 | processed_transcript | Mus_musculus | 0 | 211 |
|
ENSMUST00000122888
|
Pkp4-008 | processed_transcript | Mus_musculus | 0 | 211 |
|
ENSMUST00000184705
|
Pkp4-007 | nonsense_mediated_decay | Mus_musculus | 0 | 209 |
|
ENSMUST00000124725
|
Pkp4-011 | processed_transcript | Mus_musculus | 0 | 200 |
|
ENSMUST00000112577
|
Pkp4-010 | protein_coding | Mus_musculus | 0 | 200 |
