C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ankyrin repeat domain 54 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000411961  |
ANKRD54-004 |
ENSG00000100124 |
9606 | - |
22:37831935-37844321  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00099H | CIL_00099H_0001 | VISTA | 22:37683926-38284300 |
| CIL_0008KJ | CIL_0008KJ_0001 | VISTA | 22:37685616-38286450 |
| CIL_0008BX | CIL_0008BX_0001 | VISTA | 22:37696030-38296592 |
| CIL_0008KA | CIL_0008KA_0001 | VISTA | 22:37698338-38299192 |
| CIL_00082J | CIL_00082J_0001 | VISTA | 22:37733233-38334508 |
| CIL_0008C1 | CIL_0008C1_0001 | VISTA | 22:37746133-38346872 |
| CIL_00082K | CIL_00082K_0001 | VISTA | 22:37750385-38350990 |
| CIL_0003QH | CIL_0003QH_0001 | CGP | 22:37830855-37889407 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000040676
|
Ankrd54-001 | protein_coding | Mus_musculus | 0 | 686 |
|
ENSMUST00000133541
|
Ankrd54-002 | retained_intron | Mus_musculus | 0 | 427 |
|
ENSMUST00000153003
|
Ankrd54-005 | nonsense_mediated_decay | Mus_musculus | 0 | 272 |
|
ENSMUST00000125523
|
Ankrd54-007 | protein_coding | Mus_musculus | 0 | 265 |
|
ENSMUST00000156411
|
Ankrd54-006 | protein_coding | Mus_musculus | 6e-30 | 135 |
