C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411964 RPL7P8-003 ENSG00000235045 9606 + 1:109651370-109652099 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000411964
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000411964 0.112±0.00 0.115±0.00 0.082±0.00 0.112±0.00 0.120±0.00 0.015±0.00 0.082±0.00 0.074±0.00 0.076±0.00 0.088±0.00 0.121±0.00 0.040±0.01 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TX CIL_0006TX_0002 CGP 1:109616104-109674836

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 586
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 580
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 451
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 416
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 416
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 359
ENSDART00000019149 rpl7-001 protein_coding Danio_rerio 0 259
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 237
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 237

Loading