C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone acetyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412731 HAT1-002 ENSG00000128708 9606 + 2:171922448-171983682 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLungMuscleOvaryPlacentaTestisENST00000412731
Transcript ID Adipose Bladder Brain Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000412731 2.893±0.00 1.583±0.00 3.326±0.00 0.872±0.00 1.509±0.00 3.570±0.00 2.326±0.00 15.215±13.36 12.203±0.00 6.393±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0001 VISTA 2:171663732-172264836
CIL_0008A7 CIL_0008A7_0001 VISTA 2:171663843-172264792
CIL_0007RB CIL_0007RB_0002 VISTA 2:171664837-172267307
CIL_00062P CIL_00062P_0002 CGP 2:171687409-171999859
CIL_0007JJ CIL_0007JJ_0001 UCNEbase 2:171723627-171935515
CIL_0008C9 CIL_0008C9_0001 VISTA 2:171771791-172373521
CIL_0009AY CIL_0009AY_0001 VISTA 2:171783051-172384518
CIL_0004K0 CIL_0004K0_0001 CGP 2:171784370-171999859
CIL_0008AZ CIL_0008AZ_0001 VISTA 2:171791151-172392324
CIL_0008B0 CIL_0008B0_0001 VISTA 2:171792917-172394318
CIL_0004K4 CIL_0004K4_0001 CGP 2:171922448-172082430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028408 Hat1-201 protein_coding Mus_musculus 0 1469
ENSMUST00000112122 Hat1-001 protein_coding Mus_musculus 0 1371
ENSMUST00000145147 Hat1-002 processed_transcript Mus_musculus 0 412

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