C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LIM and senescent cell antigen-like domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413578 LIMS2-013 ENSG00000072163 9606 - 2:127638983-127650538 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyTestisENST00000413578
Transcript ID Adipose Brain Kidney Testis
ENST00000413578 15.022±0.00 5.513±0.00 3.585±0.00 17.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000197 CIL_000197_0001 CGP 2:127638381-127681786

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025254 Lims2-201 protein_coding Mus_musculus 0 457
ENSDART00000033980 lims1-201 protein_coding Danio_rerio 0 329
ENSMUST00000105468 Lims1-003 protein_coding Mus_musculus 0 263
ENSMUST00000020078 Lims1-001 protein_coding Mus_musculus 0 263
ENSMUST00000020077 Lims1-002 protein_coding Mus_musculus 0 195
ENSMUST00000148799 Lims1-005 processed_transcript Mus_musculus 3e-23 113

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